Department of Cell and Biological Systems

2025

Understanding Mitochondrial and Lysosomal Dynamics by Fluorescent Microscopy

Dionísio, P. A., Sardão, V. A. & Raimundo, N., 2025, Methods in Molecular Biology. Humana Press Inc., p. 211-221 11 p. (Methods in Molecular Biology; vol. 2878).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2024

BRD4 as an emerging epigenetic therapeutic target for inflammatory bowel disease

Ma, Z., Bolinger, A. A., Pinchuk, I. V., Tian, B. & Zhou, J., Jan 2024, Emerging Therapeutic Targets and Drug Delivery Approaches in IBD. Selaru, F. M. & Peters, D. E. (eds.). Academic Press Inc., p. 203-236 34 p. (Advances in Pharmacology; vol. 101).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Detection of Hepatitis B Virus Covalently Closed Circular DNA and Intermediates in Its Formation

Hong, X., Mendenhall, M. A. & Hu, J., 2024, Methods in Molecular Biology. Humana Press Inc., p. 99-111 13 p. (Methods in Molecular Biology; vol. 2837).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Mitochondrial quality control and the microphthalmia/transcription factor E (MiTF/TFE) family

Agostini, F. & Raimundo, N., Jan 1 2024, Mitophagy in Health and Disease: Mechanisms, Health Implications, and Therapeutic Opportunities. Elsevier, p. 277-289 13 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Mitochondria-Lysosome Crosstalk, in Disease and in Health

Lopes, C. & Raimundo, N., Jan 1 2024, The Dynamic Nature of Mitochondria: From Ultrastructure to Health and Disease. CRC Press, p. 96-107 12 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2023

Biological Nanomotors with Linear, Rotation, or Revolution Motion Mechanism

Guo, P., Noji, H., Yengo, C. M., Zhao, Z. & Grainge, I., Jan 1 2023, Biomotors and their Nanobiotechnology Applications. CRC Press, p. 1-42 42 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2022

Coordination of Phosphate and Magnesium Metabolism in Bacteria

Bruna, R. E., Kendra, C. G. & Pontes, M. H., 2022, Advances in Experimental Medicine and Biology. Springer, p. 135-150 16 p. (Advances in Experimental Medicine and Biology; vol. 1362).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

14 Scopus citations

Disrupted cellular quality control mechanisms in aging

Carvalho, C., Pires, J. F., Moreira, P. I. & Raimundo, N., Jan 1 2022, Aging: From Fundamental Biology to Societal Impact. Elsevier, p. 359-384 26 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Single-Molecule Manipulation Study of Chaperoned SNARE Folding and Assembly with Optical Tweezers

Jin, H., Ge, J., Yang, J. & Zhang, Y., 2022, Methods in Molecular Biology. Humana Press Inc., p. 461-481 21 p. (Methods in Molecular Biology; vol. 2478).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

Single-Molecule Optical Tweezers Study of Protein–Membrane Interactions

Ma, L., Ge, J., Bian, X. & Zhang, Y., 2022, Methods in Molecular Biology. Humana Press Inc., p. 367-383 17 p. (Methods in Molecular Biology; vol. 2473).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2021

A Co-culture Model to Study the Effect of Kidney Fibroblast-p90RSK on Epithelial Cell Survival

Lin, L., White, S. & Hu, K., 2021, Methods in Molecular Biology. Humana Press Inc., p. 63-71 9 p. (Methods in Molecular Biology; vol. 2346).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

3 Scopus citations

The hepatitis B virus polymerase

Clark, D. N., Tajwar, R., Hu, J. & Tavis, J. E., Jan 2021, Viral Replication Enzymes and their Inhibitors Part B. Cameron, C. E., Arnold, J. J. & Kaguni, L. S. (eds.). Academic Press, p. 195-226 32 p. (Enzymes; vol. 50).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

6 Scopus citations

2019

HIV–HBV and HIV–HCV coinfection and liver cancer development

Hu, J., Liu, K. & Luo, J., 2019, Cancer Treatment and Research. Springer International Publishing, p. 231-250 20 p. (Cancer Treatment and Research; vol. 177).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

54 Scopus citations

2018

Cytolytic T lymphocyte clones in anti-viral immunity: Effector function in vivo and mechanism of action

Braciale, T. J., Lukacher, A. E., Sweetser, M. T. & Braciale, V. L., Jan 1 2018, Cytolytic Lymphocytes and Complement Effectors of the Immune System. CRC Press, Vol. 2. p. 161-174 14 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Fluorescence-Based Measurements of Store-Operated Ca ²⁺ Entry in Cancer Cells Using Fluo-4 and Confocal Live-Cell Imaging

Lu, F., Sun, J., Sun, T., Cheng, H. & Yang, S., 2018, Methods in Molecular Biology. Humana Press Inc., p. 63-68 6 p. (Methods in Molecular Biology; vol. 1843).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

3 Scopus citations

Immunosuppression by intestinal stromal cells

Pinchuk, I. & Powell, D. W., 2018, Advances in Experimental Medicine and Biology. Springer New York LLC, p. 115-129 15 p. (Advances in Experimental Medicine and Biology; vol. 1060).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

12 Scopus citations

Lost in translation: Evidence for protein synthesis deficits in ALS/FTD and related neurodegenerative diseases

Lehmkuhl, E. M. & Zarnescu, D. C., 2018, Advances in Neurobiology. Springer New York LLC, p. 283-301 19 p. (Advances in Neurobiology; vol. 20).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

35 Scopus citations

Patch-Clamp Recording of the CRAC Channel Current in STIM-Orai Overexpressing Cells

Zhang, Y., Zheng, S., Zhou, Y., Gill, D. L. & Wang, Y., 2018, Methods in Molecular Biology. Humana Press Inc., p. 1-16 16 p. (Methods in Molecular Biology; vol. 1843).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Sphingolipids as Regulators of Autophagy and Endocytic Trafficking

Young, M. M. & Wang, H. G., Jan 1 2018, Advances in Cancer Research. Chalfant, C. E. & Fisher, P. B. (eds.). Academic Press Inc., p. 27-60 34 p. (Advances in Cancer Research; vol. 140).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

32 Scopus citations

2017

Adult Congenital Heart Disease

Briston, D. & Bradley, E., Jan 1 2017, Encyclopedia of Cardiovascular Research and Medicine. Elsevier, Vol. 1-4. p. 1-9 9 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Assessing the molecular nature of the STIM1/orai1 coupling interface using FRET approaches

Zhou, Y., Wang, Y. & Gill, D. L., Jan 1 2017, Calcium Entry Channels in Non-Excitable Cells. CRC Press, p. 127-144 18 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

4 Scopus citations

Examination of mitochondrial ion conductance by patch clamp in intact neurons and mitochondrial membrane preparations

Jonas, E. A. & Mnatsakanyan, N., 2017, Neuromethods. Humana Press Inc., p. 211-238 28 p. (Neuromethods; vol. 123).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

Generation and infection of organotypic cultures with Epstein-Barr virus

Temple, R. M., Meyers, C. & Sample, C. E., 2017, Methods in Molecular Biology. Humana Press Inc., p. 65-78 14 p. (Methods in Molecular Biology; vol. 1532).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

9 Scopus citations

In vitro assays for RNA binding and protein priming of hepatitis B virus polymerase

Clark, D. N., Jones, S. A. & Hu, J., 2017, Methods in Molecular Biology. Humana Press Inc., p. 157-177 21 p. (Methods in Molecular Biology; vol. 1540).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

6 Scopus citations

The STIM-Orai pathway: Conformational coupling between STIM and Orai in the activation of store-operated Ca²⁺ entry

Nwokonko, R. M., Cai, X., Loktionova, N. A., Wang, Y., Zhou, Y. & Gill, D. L., 2017, Advances in Experimental Medicine and Biology. Springer New York LLC, p. 83-98 16 p. (Advances in Experimental Medicine and Biology; vol. 993).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

33 Scopus citations

2016

EGCG in autoimmunity

Soliman, S., Elangovan, L., Du, Y. & Mohan, C., Jan 1 2016, Advances in Medicine and Biology.. Nova Science Publishers, Inc., Vol. 102. p. 1-37 37 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

Gene expression profiling and biomarkers in ARDS

Howrylak, J. & Choi, A. M. K., Apr 19 2016, Acute Respiratory Distress Syndrome, Second Edition. CRC Press, p. 220-236 17 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

What Do Mouse Models Teach Us about Human Systemic Lupus Erythematosus?

Du, Y. & Mohan, C., 2016, Systemic Lupus Erythematosus: Basic, Applied and Clinical Aspects. Elsevier Inc., p. 265-271 7 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

2015

Epigenetic drugs for cancer therapy

Yan, B., Li, X., Johnson, A., Yang, Y., Jian, W. & Qiu, Y., Jan 1 2015, Epigenetic Gene Expression and Regulation. Elsevier Inc., p. 397-423 27 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

4 Scopus citations

Self-assembling virus-like and virus-unlike particles

Zlotnick, A., Francis, S., Lee, L. S. & Wang, J. C. Y., Jan 1 2015, Viral Nanotechnology. CRC Press, p. 13-26 14 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2 Scopus citations

The Mitochondrial Permeability Transition Pore, the c-Subunit of the F₁F_o ATP Synthase, Cellular Development, and Synaptic Efficiency

Jonas, E. A., Porter, G. A., Beutner, G., Mnatsakanyan, N. & Alavian, K. N., Sep 25 2015, The Functions, Disease-Related Dysfunctions, and Therapeutic Targeting of Neuronal Mitochondria. wiley, p. 31-64 34 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2014

Image fusion technology

Brunner, G., Yang, E. Y., Morrisett, J. D., Garami, Z. & Nambi, V., Jul 1 2014, Multi-Modality Atherosclerosis Imaging and Diagnosis. Springer New York, p. 385-398 14 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Native human papillomavirus production, quantification, and infectivity analysis

Biryukov, J., Cruz, L., Ryndock, E. J. & Meyers, C., Oct 27 2014, Cervical Cancer: Methods and Protocols. Springer New York, p. 317-331 15 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

9 Scopus citations

Tissue plasminogen activator and chronic kidney disease: More than a simple protease

Lin, L. & Hu, K., Jan 1 2014, Plasminogen Activator: Genetic Factors, Functions and Clinical Applications. Nova Science Publishers, Inc., p. 53-68 16 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2 Scopus citations

2013

Flies lies in motion: What drosophila can tell us about amyotrophic lateral sclerosis

Morera, A. A., Coyne, A. & Zarnescu, D. C., Jun 2013, Drosophila Melanogaster Models of Motor Neuron Disease. Nova Science Publishers, Inc., p. 57-83 27 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Helicobacter pylori Vaccine Development

Pinchuk, I. & Beswick, E., 2013, Helicobacter pylori: Detection, Methods and Health Implication. Nova Science Publishers, Inc.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Products of tobacco combustion

Bascom, R., Dimmock, A. E. F. & Howrylak, J. A., Aug 1 2013, The Toxicant Induction of Irritant Asthma, Rhinitis, and Related Conditions. Springer US, p. 131-192 62 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Structure, function, and regulation of desmosomes

Kowalczyk, A. P. & Green, K. J., 2013, The Molecular Biology of Cadherins. Elsevier B.V., p. 95-118 24 p. (Progress in Molecular Biology and Translational Science; vol. 116).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

198 Scopus citations

The cross talk between apoptosis and autophagy

Young, M. M. & Wang, H. G., Jan 1 2013, Autophagy and Cancer. Springer New York, p. 205-224 20 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

The role of store-operated calcium channel in chronic inflammation

Yang, S. & Chang, W. C., Dec 1 2013, Chronic Inflammation: Causes, Treatment Options and Role in Disease. Nova Science Publishers, Inc., p. 1-18 18 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

The therapeutic potential of nanoscale sphingolipid technologies

Hankins, J. L., Doshi, U. A., Haakenson, J. K., Young, M. M., Barth, B. M. & Kester, M., 2013, Sphingolipids: Basic Science and Drug Development. Springer Science and Business Media, LLC, p. 197-210 14 p. (Handbook of Experimental Pharmacology; vol. 215).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

11 Scopus citations

2012

Basics of the cytoskeleton: Myosins

Quintero, O. A., Moore, J. E. & Yengo, C., Dec 1 2012, Cytoskeleton and Human Disease. Humana Press Inc., Vol. 9781617797880. p. 73-100 28 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

G-Protein-Coupled Receptors in the Heart

Martin, M. L., Belmonte, S. L., Ram, R., Kamal, F. A. & Blaxall, B. C., Jul 18 2012, Muscle: Fundamental Biology and Mechanisms of Disease. Elsevier, Vol. 1-2. p. 87-112 26 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Mouse models for tumor metastasis

Yang, S., Zhang, J. J. & Huang, X. Y., 2012, Rational Drug Design: Methods and Protocols. Humana Press Inc., p. 221-228 8 p. (Methods in Molecular Biology; vol. 928).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

92 Scopus citations

Neurodegeneration in diabetic retinopathy

Barber, A. J., Robinson, W. F. & Jackson, G. R., Jan 1 2012, Visual Dysfunction in Diabetes: The Science of Patient Impairment and Health Care. Springer New York, p. 189-209 21 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

Rabbit Genetics and Transgenic Models

Christensen, N. & Peng, X., Jan 1 2012, The Laboratory Rabbit, Guinea Pig, Hamster, and Other Rodents. Elsevier, p. 165-193 29 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

8 Scopus citations

2011

Novel delivery strategies for DNA

Hu, J., Cladel, N. & Christensen, N., 2011, DNA Vaccines: Types, Advantages and Limitations. Nova Science Publishers, Inc., p. 69-93 25 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Posttranscriptional Regulation of Ornithine Decarboxylase

Nowotarski, S. L., Origanti, S. & Shantz, L. M., 2011, Methods in Molecular Biology. Humana Press Inc., p. 279-292 14 p. (Methods in Molecular Biology; vol. 720).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

5 Scopus citations

Principles of IRE1 modulation using chemical tools

Lee, K. P. K. & Sicheri, F., 2011, Methods in Enzymology. C ed. Academic Press Inc., p. 271-294 24 p. (Methods in Enzymology; vol. 490, no. C).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2 Scopus citations

2010

Antifungal activity of medicinal plant extracts and phytocompounds: A review

Aqil, F., Zahin, M., Ahmad, I., Owais, M., Khan, M. S. A., Bansal, S. S. & Farooq, S., 2010, Combating Fungal Infections: Problems and Remedy. Springer-Verlag Berlin Heidelberg, p. 449-484 36 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

39 Scopus citations

Department of Cell and Biological Systems

Research output

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