Projects per year
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Collaborations and top research areas from the last five years
Projects
- 22 Finished
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Digitization PEN: Partnering the Penn State Herbarium (PAC) to Contextualize the Mid-Atlantic Megalopolis
Depamphilis, C. W. & Brooks, R. P.
9/15/17 → 8/31/23
Project: Research project
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RESEARCH-PGR: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops
Guiltinan, M., Tiffin, P., Depamphilis, C. W., Marden, J. H. & Maximova, S.
9/15/16 → 8/31/23
Project: Research project
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Evolutionary Gain and Loss of Function in Parasitic Plant Genomes
Westwood, J. H., Depamphilis, C. W., Yoder, J. I. & Timko, M. P.
8/1/13 → 7/31/18
Project: Research project
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MRI: Acquisition of an Illumina HiSeq2000 as a core sequencing instrument for genomics and gene expression research
Axtell, M., Depamphilis, C. W., Marden, J. H., Roossinck, M. M. J. & Albert, I.
10/1/12 → 9/30/15
Project: Research project
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De novo Assembly and Comparative Analyses of Mitochondrial Genomes in Piperales
Yu, R., Chen, X., Long, L., Jost, M., Zhao, R., Liu, L., Mower, J. P., dePamphilis, C. W., Wanke, S. & Jiao, Y., Mar 3 2023, In: Genome biology and evolution. 15, 3Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Extra-large G proteins have extra-large effects on agronomic traits and stress tolerance in maize and rice
Cantos, C. F., dePamphilis, C. W. & Assmann, S. M., Sep 2023, In: Trends in Plant Science. 28, 9, p. 1033-1044 12 p.Research output: Contribution to journal › Review article › peer-review
Open Access3 Scopus citations -
Phylotranscriptomic Analyses of Mycoheterotrophic Monocots Show a Continuum of Convergent Evolutionary Changes in Expressed Nuclear Genes From Three Independent Nonphotosynthetic Lineages
Timilsena, P. R., Barrett, C. F., Piñeyro-Nelson, A., Wafula, E. K., Ayyampalayam, S., McNeal, J. R., Yukawa, T., Givnish, T. J., Graham, S. W., Pires, J. C., Davis, J. I., Ané, C., Stevenson, D. W., Leebens-Mack, J., Martínez-Salas, E., Álvarez-Buylla, E. R. & dePamphilis, C. W., Jan 4 2023, In: Genome biology and evolution. 15, 1Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
PlantTribes2: Tools for comparative gene family analysis in plant genomics
Wafula, E. K., Zhang, H., Von Kuster, G., Leebens-Mack, J. H., Honaas, L. A. & dePamphilis, C. W., Jan 31 2023, In: Frontiers in Plant Science. 13, 1011199.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Transcriptomic approach to uncover dynamic events in the development of mid-season sunburn in apple fruit
Waite, J. M., Kelly, E. A., Zhang, H., Hargarten, H. L., Waliullah, S., Altman, N. S., dePamphilis, C. W., Honaas, L. A. & Kalcsits, L., Aug 2023, In: G3: Genes, Genomes, Genetics. 13, 8, jkad120.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations