Projects per year
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Collaborations and top research areas from the last five years
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Collaborative Research: RESEARCH-PGR: The genomics of host-specific response and adaptation in the parasitic agricultural pest, Cuscuta
Lasky, J. R. (PI), Depamphilis, C. W. (CoPI) & Axtell, M. (CoPI)
11/1/24 → 10/31/27
Project: Research project
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Digitization PEN: Partnering the Penn State Herbarium (PAC) to Contextualize the Mid-Atlantic Megalopolis
Depamphilis, C. W. (PI) & Brooks, R. P. (CoPI)
9/15/17 → 8/31/23
Project: Research project
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RESEARCH-PGR: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops
Guiltinan, M. (PI), Depamphilis, C. W. (CoPI), Marden, J. H. (CoPI), Tiffin, P. (CoPI) & Maximova, S. (CoPI)
9/15/16 → 8/31/24
Project: Research project
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Collaborative Research: Genetic diversity, resistance genes, and negative density dependence in tropical tree seedling dynamics
Marden, J. H. (PI) & Depamphilis, C. W. (CoPI)
7/15/15 → 6/30/19
Project: Research project
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Evolutionary Gain and Loss of Function in Parasitic Plant Genomes
Westwood, J. H. (PI), Depamphilis, C. W. (CoPI), Yoder, J. I. (CoPI) & Timko, M. P. (CoPI)
8/1/13 → 7/31/18
Project: Research project
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Chromosome level assembly and annotation of Cuscuta campestris Yunck. (“field dodder”), a model parasitic plant
Cerda-Herrera, J. D., Zhang, H., Wafula, E. K., Adhikari, S., Park, S. Y., Carey, S. B., Harkess, A., Ralph, P. E., Westwood, J. H., Axtell, M. J. & DePamphilis, C. W., Oct 1 2025, In: Annals of the Entomological Society of America. 15, 10, jkaf193.Research output: Contribution to journal › Article › peer-review
Open Access -
Local gene duplications drive extensive NLR copy number variation across multiple genotypes of Theobroma cacao
Winters, N. P., Wafula, E. K., Timilsena, P. R., Ralph, P. E., Maximova, S. N., De Pamphilis, C. W., Guiltinan, M. J. & Marden, J. H., Sep 2025, In: G3: Genes, Genomes, Genetics. 15, 9, jkaf147.Research output: Contribution to journal › Article › peer-review
Open Access -
The floral ABCs of Hydnora, one of the most bizarre parasitic plants in the world, and its autotrophic relatives of the order Piperales
Pabón-Mora, N., González, F., dePamphilis, C. W., Bolin, J. F., Neinhuis, C., Alzate, J. F. & Wanke, S., Dec 2025, In: EvoDevo. 16, 1, 16.Research output: Contribution to journal › Article › peer-review
Open Access -
A combination of conserved and diverged responses underlies Theobroma cacao’s defense response to Phytophthora palmivora
Winters, N. P., Wafula, E. K., Knollenberg, B. J., Hämälä, T., Timilsena, P. R., Perryman, M., Zhang, D., Sheaffer, L. L., Praul, C. A., Ralph, P. E., Prewitt, S., Leandro-Muñoz, M. E., Delgadillo-Duran, D. A., Altman, N. S., Tiffin, P., Maximova, S. N., dePamphilis, C. W., Marden, J. H. & Guiltinan, M. J., Dec 2024, In: BMC Biology. 22, 1, 38.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Correction to: Variations and reduction of plastome are associated with the evolution of parasitism in Convolvulaceae (Plant Molecular Biology, (2024), 114, 3, (40), 10.1007/s11103-024-01440-1)
Chen, L. Q., Li, X., Yao, X., Li, D. Z., Barrett, C., dePamphilis, C. W. & Yu, W. B., Jun 2024, In: Plant molecular biology. 114, 3, 58.Research output: Contribution to journal › Comment/debate › peer-review