Projects per year
Personal profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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Dive into the research topics where David Koslicki is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
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Leveraging k-mer sketching statistics to enhance metagenomic methods and alignment algorithms
Medvedev, P. (PI), Blanca Pimentel, A. A. (CoPI) & Koslicki, D. (CoPI)
National Institute of General Medical Sciences
8/2/22 → 5/31/25
Project: Research project
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Biomedical Data Translator Development of Autonomous Relay Agent: ARAX
Ramsey, S. S. A. (PI), Koslicki, D. (CoPI) & Deutsch, E. E. (CoPI)
National Center for Advancing Translational Sciences
1/23/20 → 11/30/23
Project: Research project
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QuBBD: Fast, Efficient Mathematical Approach to the Analysis of the Human Microbiome through Biodiversity Optimization
Koslicki, D. (PI)
12/1/19 → 5/31/22
Project: Research project
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QuBBD: Fast, Efficient Mathematical Approach to the Analysis of the Human Microbiome through Biodiversity Optimization
Koslicki, D. (PI), Ivanov, I. I. (CoPI) & Foucart, S. (CoPI)
6/1/18 → 7/31/20
Project: Research project
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YACHT: an ANI-based statistical test to detect microbial presence/absence in a metagenomic sample
Koslicki, D., White, S., Ma, C. & Novikov, A., Feb 1 2024, In: Bioinformatics. 40, 2, btae047.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges
Fecho, K., Bizon, C., Issabekova, T., Moxon, S., Thessen, A. E., Abdollahi, S., Baranzini, S. E., Belhu, B., Byrd, W. E., Chung, L., Crouse, A., Duby, M. P., Ferguson, S., Foksinska, A., Forero, L., Friedman, J., Gardner, V., Glusman, G., Hadlock, J. & Hanspers, K. & 22 others, , Sep 14 2023, In: Journal of Clinical and Translational Science. 7, 1, e214.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
ARAX: a graph-based modular reasoning tool for translational biomedicine
Glen, A. K., Ma, C., Mendoza, L., Womack, F., Wood, E. C., Sinha, M., Acevedo, L., Kvarfordt, L. G., Peene, R. C., Liu, S., Hoffman, A. S., Roach, J. C., Deutsch, E. W., Ramsey, S. A. & Koslicki, D., Mar 1 2023, In: Bioinformatics. 39, 3, btad082.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Deriving confidence intervals for mutation rates across a wide range of evolutionary distances using FracMinHash
Hera, M. R., Pierce-Ward, N. T. & Koslicki, D., Jul 2023, In: Genome research. 33, 7, p. 1061-1068 8 p.Research output: Contribution to journal › Article › peer-review
Open Access8 Scopus citations -
Finding phylogeny-aware and biologically meaningful averages of metagenomic samples: L2UniFrac
Wei, W., Millward, A. & Koslicki, D., Jun 1 2023, In: Bioinformatics. 39, p. I57-I65Research output: Contribution to journal › Article › peer-review
Open Access