Personal profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 3 Good Health and Well-being -
SDG 7 Affordable and Clean Energy
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Collaborations and top research areas from the last five years
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Understanding the predeterminants of transcription factor regulatory activity
Mahony, S. A. (PI) & Mahony, S. S. A. (CoPI)
National Institute of General Medical Sciences
1/1/22 → 12/31/26
Project: Research project
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CAREER: Predicting transcription factor binding dynamics across cell types and species
Mahony, S. A. (PI)
6/1/21 → 5/31/27
Project: Research project
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Genome-wide structural organization of proteins within human gene regulatory complexes
Mahony, S. A. (PI) & Pugh, F. B. (CoPI)
National Institute of General Medical Sciences
1/19/18 → 12/31/21
Project: Research project
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A 2D segmentation method for jointly characterizing epigenetic dynamics in multiple cell lines
Mahony, S. A. (PI) & Zhang, Y. (CoPI)
National Institute of General Medical Sciences
8/1/17 → 7/31/21
Project: Research project
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ABI INNOVATION: Characterizing protein-DNA interactions from high-resolution assays
Mahony, S. A. (PI)
6/1/16 → 5/31/20
Project: Research project
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Chromatin state dynamics during the Plasmodium falciparum intraerythrocytic development cycle
Brown, A. S., Llinás, M. & Mahony, S., Dec 2026, In: BMC genomics. 27, 1, 142.Research output: Contribution to journal › Article › peer-review
Open Access -
Optimized ChIP-exo for mammalian cells and patterned sequencing flow cells
James, D. Q., Mukherjee, S., Cannon, C. C. & Mahony, S., Jan 7 2026, In: G3 (Bethesda, Md.). 16, 1Research output: Contribution to journal › Article › peer-review
Open Access -
Intragenomic conflict associated with extreme phenotypic plasticity in queen-worker caste determination in honey bees (Apis mellifera)
Bresnahan, S. T., Mahony, S., Anton, K., Harpur, B. & Grozinger, C. M., Dec 2025, In: Genome biology. 26, 1, 171.Research output: Contribution to journal › Article › peer-review
Open Access2 Link opens in a new tab Scopus citations -
Perspective on recent developments and challenges in regulatory and systems genomics
Zeitlinger, J., Roy, S., Ay, F., Mathelier, A., Medina-Rivera, A., Mahony, S., Sinha, S. & Ernst, J., 2025, In: Bioinformatics Advances. 5, 1, vbaf106.Research output: Contribution to journal › Review article › peer-review
Open Access3 Link opens in a new tab Scopus citations -
Publisher Correction: The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles (Genome Biology, (2023), 24, 1, (79), 10.1186/s13059-023-02915-y)
ENCODE Imputation Challenge Participants, Dec 2025, In: Genome biology. 26, 1, 31.Research output: Contribution to journal › Comment/debate › peer-review
Open Access