TY - GEN
T1 - Bi-directional Synthesis of Pre- and Post-contrast MRI via Guided Feature Disentanglement
AU - Xue, Yuan
AU - Dewey, Blake E.
AU - Zuo, Lianrui
AU - Han, Shuo
AU - Carass, Aaron
AU - Duan, Peiyu
AU - Remedios, Samuel W.
AU - Pham, Dzung L.
AU - Saidha, Shiv
AU - Calabresi, Peter A.
AU - Prince, Jerry L.
N1 - Publisher Copyright:
© 2022, The Author(s), under exclusive license to Springer Nature Switzerland AG.
PY - 2022
Y1 - 2022
N2 - Magnetic resonance imaging (MRI) with gadolinium contrast is widely used for tissue enhancement and better identification of active lesions and tumors. Recent studies have shown that gadolinium deposition can accumulate in tissues including the brain, which raises safety concerns. Prior works have tried to synthesize post-contrast T1-weighted MRIs from pre-contrast MRIs to avoid the use of gadolinium. However, contrast and image representations are often entangled during the synthesis process, resulting in synthetic post-contrast MRIs with undesirable contrast enhancements. Moreover, the synthesis of pre-contrast MRIs from post-contrast MRIs which can be useful for volumetric analysis is rarely investigated in the literature. To tackle pre- and post- contrast MRI synthesis, we propose a BI-directional Contrast Enhancement Prediction and Synthesis (BICEPS) network that enables disentanglement of contrast and image representations via a bi-directional image-to-image translation (I2I) model. Our proposed model can perform both pre-to-post and post-to-pre contrast synthesis, and provides an interpretable synthesis process by predicting contrast enhancement maps from the learned contrast embedding. Extensive experiments on a multiple sclerosis dataset demonstrate the feasibility of applying our bidirectional synthesis and show that BICEPS outperforms current methods.
AB - Magnetic resonance imaging (MRI) with gadolinium contrast is widely used for tissue enhancement and better identification of active lesions and tumors. Recent studies have shown that gadolinium deposition can accumulate in tissues including the brain, which raises safety concerns. Prior works have tried to synthesize post-contrast T1-weighted MRIs from pre-contrast MRIs to avoid the use of gadolinium. However, contrast and image representations are often entangled during the synthesis process, resulting in synthetic post-contrast MRIs with undesirable contrast enhancements. Moreover, the synthesis of pre-contrast MRIs from post-contrast MRIs which can be useful for volumetric analysis is rarely investigated in the literature. To tackle pre- and post- contrast MRI synthesis, we propose a BI-directional Contrast Enhancement Prediction and Synthesis (BICEPS) network that enables disentanglement of contrast and image representations via a bi-directional image-to-image translation (I2I) model. Our proposed model can perform both pre-to-post and post-to-pre contrast synthesis, and provides an interpretable synthesis process by predicting contrast enhancement maps from the learned contrast embedding. Extensive experiments on a multiple sclerosis dataset demonstrate the feasibility of applying our bidirectional synthesis and show that BICEPS outperforms current methods.
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U2 - 10.1007/978-3-031-16980-9_6
DO - 10.1007/978-3-031-16980-9_6
M3 - Conference contribution
C2 - 36326241
AN - SCOPUS:85140471845
SN - 9783031169793
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 55
EP - 65
BT - Simulation and Synthesis in Medical Imaging - 7th International Workshop, SASHIMI 2022, Held in Conjunction with MICCAI 2022, Proceedings
A2 - Zhao, Can
A2 - Svoboda, David
A2 - Wolterink, Jelmer M.
A2 - Escobar, Maria
PB - Springer Science and Business Media Deutschland GmbH
T2 - 7th International Workshop on Simulation and Synthesis in Medical Imaging, SASHIMI 2022, held in conjunction with 25th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2022
Y2 - 18 September 2022 through 18 September 2022
ER -