TY - JOUR
T1 - Change in Nutritional Status Modulates the Abundance of Critical Pre-initiation Intermediate Complexes During Translation Initiation in Vivo
AU - Singh, Chingakham Ranjit
AU - Udagawa, Tsuyoshi
AU - Lee, Bumjun
AU - Wassink, Sarah
AU - He, Hui
AU - Yamamoto, Yasufumi
AU - Anderson, James T.
AU - Pavitt, Graham D.
AU - Asano, Katsura
N1 - Funding Information:
We are indebted to Ernie Hannig, and Leos Valasek for purified eIF2 and the NIP1-FL strain, respectively. We also thank Toshi Inada for a timely gift of materials and personal communication, and Tom Rajbandary for discussion. This work was supported by the NIH COBRE awards P20 RR15563 and RR16475, the NCRR K-INBRE pilot grants P20 RR016475, matching support from the State of Kansas and the KSU, and NIH grant R01 GM64781 (to K.A.) and a project grant from The Wellcome Trust (to G.D.P.).
PY - 2007/7/6
Y1 - 2007/7/6
N2 - In eukaryotic translation initiation, eIF2{radical dot}GTP-Met-tRNAiMet ternary complex (TC) interacts with eIF3-eIF1-eIF5 complex to form the multifactor complex (MFC), while eIF2{radical dot}GDP associates with eIF2B for guanine nucleotide exchange. Gcn2p phosphorylates eIF2 to inhibit eIF2B. Here we evaluate the abundance of eIFs and their pre-initiation intermediate complexes in gcn2 deletion mutant grown under different conditions. We show that ribosomes are three times as abundant as eIF1, eIF2 and eIF5, while eIF3 is half as abundant as the latter three and hence, the limiting component in MFC formation. By quantitative immunoprecipitation, we estimate that ∼ 15% of the cellular eIF2 is found in TC during rapid growth in a complex rich medium. Most of the TC is found in MFC, and important, ∼ 40% of the total eIF2 is associated with eIF5 but lacks tRNAiMet. When the gcn2Δ mutant grows less rapidly in a defined complete medium, TC abundance increases threefold without altering the abundance of each individual factor. Interestingly, the TC increase is suppressed by eIF5 overexpression and Gcn2p expression. Thus, eIF2B-catalyzed TC formation appears to be fine-tuned by eIF2 phosphorylation and the novel eIF2/eIF5 complex lacking tRNAiMet.
AB - In eukaryotic translation initiation, eIF2{radical dot}GTP-Met-tRNAiMet ternary complex (TC) interacts with eIF3-eIF1-eIF5 complex to form the multifactor complex (MFC), while eIF2{radical dot}GDP associates with eIF2B for guanine nucleotide exchange. Gcn2p phosphorylates eIF2 to inhibit eIF2B. Here we evaluate the abundance of eIFs and their pre-initiation intermediate complexes in gcn2 deletion mutant grown under different conditions. We show that ribosomes are three times as abundant as eIF1, eIF2 and eIF5, while eIF3 is half as abundant as the latter three and hence, the limiting component in MFC formation. By quantitative immunoprecipitation, we estimate that ∼ 15% of the cellular eIF2 is found in TC during rapid growth in a complex rich medium. Most of the TC is found in MFC, and important, ∼ 40% of the total eIF2 is associated with eIF5 but lacks tRNAiMet. When the gcn2Δ mutant grows less rapidly in a defined complete medium, TC abundance increases threefold without altering the abundance of each individual factor. Interestingly, the TC increase is suppressed by eIF5 overexpression and Gcn2p expression. Thus, eIF2B-catalyzed TC formation appears to be fine-tuned by eIF2 phosphorylation and the novel eIF2/eIF5 complex lacking tRNAiMet.
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U2 - 10.1016/j.jmb.2007.04.034
DO - 10.1016/j.jmb.2007.04.034
M3 - Article
C2 - 17512538
AN - SCOPUS:34249699125
SN - 0022-2836
VL - 370
SP - 315
EP - 330
JO - Journal of Molecular Biology
JF - Journal of Molecular Biology
IS - 2
ER -