TY - JOUR
T1 - Classification of short single-lead electrocardiograms (ECGs) for atrial fibrillation detection using piecewise linear spline and XGBoost
AU - Chen, Yao
AU - Wang, Xiao
AU - Jung, Yonghan
AU - Abedi, Vida
AU - Zand, Ramin
AU - Bikak, Marvi
AU - Adibuzzaman, Mohammad
N1 - Funding Information:
Xiao Wang’s research is supported by NSF-DMS 1613060 and an i-GSDI award from Purdue University.
Publisher Copyright:
© 2018 Institute of Physics and Engineering in Medicine.
PY - 2018/10/24
Y1 - 2018/10/24
N2 - Objective: Detection of atrial fibrillation is important for risk stratification of stroke. We developed a novel methodology to classify electrocardiograms (ECGs) to normal, atrial fibrillation and other cardiac dysrhythmias as defined by the PhysioNet Challenge 2017. Approach: More specifically, we used piecewise linear splines for the feature selection and a gradient boosting algorithm for the classifier. In the algorithm, the ECG waveform is fitted by a piecewise linear spline, and morphological features relating to the piecewise linear spline coefficients are extracted. XGBoost is used to classify the morphological coefficients and heart rate variability features. Main results: The performance of the algorithm was evaluated by the PhysioNet Challenge database (3658 ECGs classified by experts). Our algorithm achieved an average F 1 score of 81% for a 10-fold cross-validation and also achieved 81% for F 1 score on the independent testing set. This score is similar to the top 9th score (81%) in the official phase of the PhysioNet Challenge 2017. Significance: Our algorithm presents a good performance on multi-label short ECG classification with selected morphological features.
AB - Objective: Detection of atrial fibrillation is important for risk stratification of stroke. We developed a novel methodology to classify electrocardiograms (ECGs) to normal, atrial fibrillation and other cardiac dysrhythmias as defined by the PhysioNet Challenge 2017. Approach: More specifically, we used piecewise linear splines for the feature selection and a gradient boosting algorithm for the classifier. In the algorithm, the ECG waveform is fitted by a piecewise linear spline, and morphological features relating to the piecewise linear spline coefficients are extracted. XGBoost is used to classify the morphological coefficients and heart rate variability features. Main results: The performance of the algorithm was evaluated by the PhysioNet Challenge database (3658 ECGs classified by experts). Our algorithm achieved an average F 1 score of 81% for a 10-fold cross-validation and also achieved 81% for F 1 score on the independent testing set. This score is similar to the top 9th score (81%) in the official phase of the PhysioNet Challenge 2017. Significance: Our algorithm presents a good performance on multi-label short ECG classification with selected morphological features.
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U2 - 10.1088/1361-6579/aadf0f
DO - 10.1088/1361-6579/aadf0f
M3 - Article
C2 - 30183685
AN - SCOPUS:85055911804
SN - 0967-3334
VL - 39
JO - Physiological Measurement
JF - Physiological Measurement
IS - 10
M1 - 104006
ER -