Development and validation of a portable device for lab-free versatile nucleic acid extraction

Anthony J. Politza, Tianyi Liu, Aneesh Kshirsagar, Ming Dong, Md Ahasan Ahamed, Weihua Guan

Research output: Contribution to journalArticlepeer-review

Abstract

Nucleic acid testing (NAT) has revolutionized diagnostics by providing precise, rapid, and scalable detection methods for diverse biological samples. These recent advancements satisfy the increasing demand for on-site diagnostics, yet sample preparation remains a significant bottleneck for achieving highly sensitive diagnostic assays. There is an unmet need for compatible, efficient, and lab-free sample preparation for point-of-care NAT. To address this, we developed a portable, lab-free, and battery-powered device for extracting nucleic acids. We explored using low centrifugal forces with existing commercial chemistry, demonstrating excellent performance. We designed and tested a battery-powered device to enable lab-free extractions, and verified reagents stored out to 6 months, suggesting exceptional deployment capabilities. We evaluated our device, comparing our results against those from a benchtop centrifuge across three types of samples: HIV RNA in buffer, HIV RNA in plasma, and SARS-CoV-2 RNA in saliva. The portable device demonstrated excellent agreement with the benchtop centrifuge, indicating high reliability. By providing an effective on-site sample preparation solution, the widespread adoption of low centrifugal extractions will improve the sensitivity and reliability of NAT and will positively impact other point-of-care technologies such as next generation sequencing (NGS), biomarker detection, and environmental monitoring.

Original languageEnglish (US)
Pages (from-to)505-515
Number of pages11
JournalBioTechniques
Volume76
Issue number10
DOIs
StatePublished - 2024

All Science Journal Classification (ASJC) codes

  • Biotechnology
  • General Biochemistry, Genetics and Molecular Biology

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