Development of simple sequence repeat markers for the soybean rust fungus, Phakopsora pachyrhizi

Sharon J. Anderson; Christine L. Stone; Martha Lucia Posada-Buitrago; Jeffrey L. Boore; Beena A. Neelam; Robert M. Stephens; Douglas G. Luster; Reid D. Frederick; Kerry F. Pedley

doi:10.1111/j.1755-0998.2008.02272.x

Development of simple sequence repeat markers for the soybean rust fungus, Phakopsora pachyrhizi

Sharon J. Anderson, Christine L. Stone, Martha Lucia Posada-Buitrago, Jeffrey L. Boore, Beena A. Neelam, Robert M. Stephens, Douglas G. Luster, Reid D. Frederick, Kerry F. Pedley

Plant Pathology and Environmental Microbiology

Research output: Contribution to journal › Article › peer-review

12 Scopus citations

Abstract

Twenty-four simple sequence repeat markers were developed for Phakopsora pachyrhizi, a fungal pathogen of soybean (Glycine max) and other legumes. All 24 of the loci were evaluated on 28 isolates of P. pachyrhizi. Twenty-one loci were polymorphic, with allelic diversity ranging from two to eight alleles, and null alleles were observed for eight of the 24 loci. A preliminary screen with the closely related species, P. meibomiae, indicated that these primer pairs are specific to P. pachyrhizi.

Original language	English (US)
Pages (from-to)	1310-1312
Number of pages	3
Journal	Molecular Ecology Resources
Volume	8
Issue number	6
DOIs	https://doi.org/10.1111/j.1755-0998.2008.02272.x
State	Published - Nov 2008

All Science Journal Classification (ASJC) codes

Biotechnology
Ecology, Evolution, Behavior and Systematics
Genetics

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10.1111/j.1755-0998.2008.02272.x

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title = "Development of simple sequence repeat markers for the soybean rust fungus, Phakopsora pachyrhizi",

abstract = "Twenty-four simple sequence repeat markers were developed for Phakopsora pachyrhizi, a fungal pathogen of soybean (Glycine max) and other legumes. All 24 of the loci were evaluated on 28 isolates of P. pachyrhizi. Twenty-one loci were polymorphic, with allelic diversity ranging from two to eight alleles, and null alleles were observed for eight of the 24 loci. A preliminary screen with the closely related species, P. meibomiae, indicated that these primer pairs are specific to P. pachyrhizi.",

author = "Anderson, {Sharon J.} and Stone, {Christine L.} and Posada-Buitrago, {Martha Lucia} and Boore, {Jeffrey L.} and Neelam, {Beena A.} and Stephens, {Robert M.} and Luster, {Douglas G.} and Frederick, {Reid D.} and Pedley, {Kerry F.}",

year = "2008",

month = nov,

doi = "10.1111/j.1755-0998.2008.02272.x",

language = "English (US)",

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journal = "Molecular Ecology Resources",

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T1 - Development of simple sequence repeat markers for the soybean rust fungus, Phakopsora pachyrhizi

AU - Anderson, Sharon J.

AU - Stone, Christine L.

AU - Posada-Buitrago, Martha Lucia

AU - Boore, Jeffrey L.

AU - Neelam, Beena A.

AU - Stephens, Robert M.

AU - Luster, Douglas G.

AU - Frederick, Reid D.

AU - Pedley, Kerry F.

PY - 2008/11

Y1 - 2008/11

N2 - Twenty-four simple sequence repeat markers were developed for Phakopsora pachyrhizi, a fungal pathogen of soybean (Glycine max) and other legumes. All 24 of the loci were evaluated on 28 isolates of P. pachyrhizi. Twenty-one loci were polymorphic, with allelic diversity ranging from two to eight alleles, and null alleles were observed for eight of the 24 loci. A preliminary screen with the closely related species, P. meibomiae, indicated that these primer pairs are specific to P. pachyrhizi.

AB - Twenty-four simple sequence repeat markers were developed for Phakopsora pachyrhizi, a fungal pathogen of soybean (Glycine max) and other legumes. All 24 of the loci were evaluated on 28 isolates of P. pachyrhizi. Twenty-one loci were polymorphic, with allelic diversity ranging from two to eight alleles, and null alleles were observed for eight of the 24 loci. A preliminary screen with the closely related species, P. meibomiae, indicated that these primer pairs are specific to P. pachyrhizi.

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Development of simple sequence repeat markers for the soybean rust fungus, Phakopsora pachyrhizi

Abstract

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