TY - JOUR
T1 - Genome-wide association of trajectories of systolic blood pressure change
AU - Justice, Anne E.
AU - Howard, Annie Green
AU - Chittoor, Geetha
AU - Fernandez-Rhodes, Lindsay
AU - Graff, Misa
AU - Voruganti, V. Saroja
AU - Diao, Guoqing
AU - Love, Shelly Ann M.
AU - Franceschini, Nora
AU - O'Connell, Jeffrey R.
AU - Avery, Christy L.
AU - Young, Kristin L.
AU - North, Kari E.
N1 - Funding Information:
T2D-GENES is supported by National Institutes of Health (NIH) grants: U01 DK085524, U01 DK085501, U01 DK085526, U01 DK085584, and U01 DK085545. The San Antonio Family Heart Study (SAFHS) is supported by P01 HL045222; the San Antonio Family Diabetes Study (SAFDS) is supported by R01 DK047482; the San Antonio Family Gallbladder Study (SAFGS) is supported by R01 DK053889. This work is in part funded through NIH grant 2 T32 HL007055-36, the American Heart Association Postdoctoral Fellowship, NIMH-MH059490, and U01 HL084756.
Funding Information:
This article has been published as part of BMC Proceedings Volume 10 Supplement 7, 2016: Genetic Analysis Workshop 19: Sequence, Blood Pressure and Expression Data. Summary articles. The full contents of the supplement are available online at http://bmcproc.biomedcentral.com/ articles/supplements/volume-10-supplement-7. Publication of the proceedings of Genetic Analysis Workshop 19 was supported by National Institutes of Health grant R01 GM031575.
Publisher Copyright:
© 2016 The Author(s).
PY - 2016
Y1 - 2016
N2 - Background: There is great interindividual variation in systolic blood pressure (SBP) as a result of the influences of several factors, including sex, ancestry, smoking status, medication use, and, especially, age. The majority of genetic studies have examined SBP measured cross-sectionally; however, SBP changes over time, and not necessarily in a linear fashion. Therefore, this study conducted a genome-wide association (GWA) study of SBP change trajectories using data available through the Genetic Analysis Workshop 19 (GAW19) of 959 individuals from 20 extended Mexican American families from the San Antonio Family Studies with up to 4 measures of SBP. We performed structural equation modeling (SEM) while taking into account potential genetic effects to identify how, if at all, to include covariates in estimating the SBP change trajectories using a mixture model based latent class growth modeling (LCGM) approach for use in the GWA analyses. Results: The semiparametric LCGM approach identified 5 trajectory classes that captured SBP changes across age. Each LCGM identified trajectory group was ranked based on the average number of cumulative years as hypertensive. Using a pairwise comparison of these classes the heritability estimates range from 12 to 94 % (SE = 17 to 40 %). Conclusion: These identified trajectories are significantly heritable, and we identified a total of 8 promising loci that influence one's trajectory in SBP change across age. Our results demonstrate the potential utility of capitalizing on extant genetic data and longitudinal SBP assessments available through GAW19 to explore novel analytical methods with promising results.
AB - Background: There is great interindividual variation in systolic blood pressure (SBP) as a result of the influences of several factors, including sex, ancestry, smoking status, medication use, and, especially, age. The majority of genetic studies have examined SBP measured cross-sectionally; however, SBP changes over time, and not necessarily in a linear fashion. Therefore, this study conducted a genome-wide association (GWA) study of SBP change trajectories using data available through the Genetic Analysis Workshop 19 (GAW19) of 959 individuals from 20 extended Mexican American families from the San Antonio Family Studies with up to 4 measures of SBP. We performed structural equation modeling (SEM) while taking into account potential genetic effects to identify how, if at all, to include covariates in estimating the SBP change trajectories using a mixture model based latent class growth modeling (LCGM) approach for use in the GWA analyses. Results: The semiparametric LCGM approach identified 5 trajectory classes that captured SBP changes across age. Each LCGM identified trajectory group was ranked based on the average number of cumulative years as hypertensive. Using a pairwise comparison of these classes the heritability estimates range from 12 to 94 % (SE = 17 to 40 %). Conclusion: These identified trajectories are significantly heritable, and we identified a total of 8 promising loci that influence one's trajectory in SBP change across age. Our results demonstrate the potential utility of capitalizing on extant genetic data and longitudinal SBP assessments available through GAW19 to explore novel analytical methods with promising results.
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U2 - 10.1186/s12919-016-0050-9
DO - 10.1186/s12919-016-0050-9
M3 - Article
AN - SCOPUS:85016119756
SN - 1753-6561
VL - 10
JO - BMC Proceedings
JF - BMC Proceedings
M1 - 56
ER -