TY - CHAP
T1 - Green Bacteria. Insights into Green Bacterial Evolution through Genomic Analyses.
AU - Bryant, Donald A.
AU - Liu, Zhenfeng
N1 - Funding Information:
The US Department of Energy Office of Energy Biosciences ( DE-FG02-94ER20137 ), the National Science Foundation ( MCB-0523100 and MCB-1021725 ), and the National Aeronautics and Space Administration Exobiology Program ( NX09AM87G ) supported research described in this article from the laboratory of D.A.B. The community sequencing program of the Joint Genome Institute of the Department of Energy provided support to D.A.B. for sequencing the genomes of many of the phototrophs mentioned in this article. The Office of Science of the U. S. Department of Energy supports the work conducted by the DOE-Joint Genome Institute under Contract No. DE-AC02-05CH11231. The authors thank their many collaborators and colleagues for helpful discussions and suggestions.
PY - 2013
Y1 - 2013
N2 - Green bacteria are physiologically and metabolically heterogeneous assemblage of organisms that belong to three phyla of the Domain Bacteria: Chlorobi, Chloroflex, and Acidobacteria. Green bacteria are defined by their ability to synthesize one of three bacteriochlorophylls (BChls) c, d, or e and to assemble these BChls into large antenna structures known as chlorosomes. Over the past decade, the genome sequences of many green bacteria have been completed and analysed. This chapter mainly focuses on key aspects of the chlorophotoautotrophic physiology of members of the phylum Chlorobi. Until recently, this phylum was generally considered to be synonymous with the green sulfur bacteria (Order Chlorobiales). However, genome and metagenome sequencing has shown that the members of this phylum are more diverse than previously imagined. Surprisingly, early-diverging members of this phylum are aerobic chemoorganoheterotrophs and aerobic anoxygenic photoheterotrophs. The evolution of members of the phylum Chlorobi is discussed. Pathways for the synthesis of (bacterio)chlorophylls ((B). Chls) are described and discussed in the context of the Granick hypothesis, which states that biosynthetic pathways recapitulate their evolution. Finally, based upon information obtained from genome sequences and the discovery of the first phototrophic member of the phylum Acidobacteria, " Candidatus Chloracidobacterium thermophilum" (" Ca. Cab. thermophilum" ), some thoughts on the evolution of photosynthesis are discussed.
AB - Green bacteria are physiologically and metabolically heterogeneous assemblage of organisms that belong to three phyla of the Domain Bacteria: Chlorobi, Chloroflex, and Acidobacteria. Green bacteria are defined by their ability to synthesize one of three bacteriochlorophylls (BChls) c, d, or e and to assemble these BChls into large antenna structures known as chlorosomes. Over the past decade, the genome sequences of many green bacteria have been completed and analysed. This chapter mainly focuses on key aspects of the chlorophotoautotrophic physiology of members of the phylum Chlorobi. Until recently, this phylum was generally considered to be synonymous with the green sulfur bacteria (Order Chlorobiales). However, genome and metagenome sequencing has shown that the members of this phylum are more diverse than previously imagined. Surprisingly, early-diverging members of this phylum are aerobic chemoorganoheterotrophs and aerobic anoxygenic photoheterotrophs. The evolution of members of the phylum Chlorobi is discussed. Pathways for the synthesis of (bacterio)chlorophylls ((B). Chls) are described and discussed in the context of the Granick hypothesis, which states that biosynthetic pathways recapitulate their evolution. Finally, based upon information obtained from genome sequences and the discovery of the first phototrophic member of the phylum Acidobacteria, " Candidatus Chloracidobacterium thermophilum" (" Ca. Cab. thermophilum" ), some thoughts on the evolution of photosynthesis are discussed.
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U2 - 10.1016/B978-0-12-397923-0.00004-7
DO - 10.1016/B978-0-12-397923-0.00004-7
M3 - Chapter
AN - SCOPUS:84875205698
T3 - Advances in Botanical Research
SP - 99
EP - 150
BT - Advances in Botanical Research
PB - Academic Press Inc.
ER -