Hierarchical Pretraining on Multimodal Electronic Health Records

Xiaochen Wang, Junyu Luo, Jiaqi Wang, Ziyi Yin, Suhan Cui, Yuan Zhong, Yaqing Wang, Fenglong Ma

Research output: Chapter in Book/Report/Conference proceedingConference contribution

10 Scopus citations

Abstract

Pretraining has proven to be a powerful technique in natural language processing (NLP), exhibiting remarkable success in various NLP downstream tasks. However, in the medical domain, existing pretrained models on electronic health records (EHR) fail to capture the hierarchical nature of EHR data, limiting their generalization capability across diverse downstream tasks using a single pretrained model. To tackle this challenge, this paper introduces a novel, general, and unified pretraining framework called MEDHMP1, specifically designed for hierarchically multimodal EHR data. The effectiveness of the proposed MEDHMP is demonstrated through experimental results on eight downstream tasks spanning three levels. Comparisons against eighteen baselines further highlight the efficacy of our approach.

Original languageEnglish (US)
Title of host publicationEMNLP 2023 - 2023 Conference on Empirical Methods in Natural Language Processing, Proceedings
EditorsHouda Bouamor, Juan Pino, Kalika Bali
PublisherAssociation for Computational Linguistics (ACL)
Pages2839-2852
Number of pages14
ISBN (Electronic)9798891760608
DOIs
StatePublished - 2023
Event2023 Conference on Empirical Methods in Natural Language Processing, EMNLP 2023 - Hybrid, Singapore, Singapore
Duration: Dec 6 2023Dec 10 2023

Publication series

NameEMNLP 2023 - 2023 Conference on Empirical Methods in Natural Language Processing, Proceedings

Conference

Conference2023 Conference on Empirical Methods in Natural Language Processing, EMNLP 2023
Country/TerritorySingapore
CityHybrid, Singapore
Period12/6/2312/10/23

All Science Journal Classification (ASJC) codes

  • Computational Theory and Mathematics
  • Computer Science Applications
  • Information Systems
  • Linguistics and Language

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