Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica

Jacqueline Goordial; Isabelle Raymond-Bouchard; Robert Riley; Jennifer Ronholm; Nicole Shapiro; Tanja Woyke; Kurt M. LaButti; Hope Tice; Mojgan Amirebrahimi; Igor V. Grigoriev; Charles Greer; Corien Bakermans; Lyle Whyte

doi:10.1128/genomeA.00069-16

Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica

Jacqueline Goordial
, Isabelle Raymond-Bouchard
, Robert Riley
, Jennifer Ronholm
, Nicole Shapiro
, Tanja Woyke
, Kurt M. LaButti
, Hope Tice
, Mojgan Amirebrahimi
, Igor V. Grigoriev
, Charles Greer
, Corien Bakermans
, Lyle Whyte

Research output: Contribution to journal › Article › peer-review

22 Scopus citations

Abstract

Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.

Original language	English (US)
Article number	e00069-16
Journal	Genome Announcements
Volume	4
Issue number	2
DOIs	https://doi.org/10.1128/genomeA.00069-16
State	Published - 2016

All Science Journal Classification (ASJC) codes

Molecular Biology
Genetics

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10.1128/genomeA.00069-16

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Goordial, J., Raymond-Bouchard, I., Riley, R., Ronholm, J., Shapiro, N., Woyke, T., LaButti, K. M., Tice, H., Amirebrahimi, M., Grigoriev, I. V., Greer, C., Bakermans, C., & Whyte, L. (2016). Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica. Genome Announcements, 4(2), Article e00069-16. https://doi.org/10.1128/genomeA.00069-16

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title = "Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica",

abstract = "Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.",

author = "Jacqueline Goordial and Isabelle Raymond-Bouchard and Robert Riley and Jennifer Ronholm and Nicole Shapiro and Tanja Woyke and LaButti, \{Kurt M.\} and Hope Tice and Mojgan Amirebrahimi and Grigoriev, \{Igor V.\} and Charles Greer and Corien Bakermans and Lyle Whyte",

note = "Publisher Copyright: {\textcopyright} 2016 Goordial et al.",

year = "2016",

doi = "10.1128/genomeA.00069-16",

language = "English (US)",

volume = "4",

journal = "Genome Announcements",

issn = "2169-8287",

publisher = "American Society for Microbiology",

number = "2",

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Goordial, J, Raymond-Bouchard, I, Riley, R, Ronholm, J, Shapiro, N, Woyke, T, LaButti, KM, Tice, H, Amirebrahimi, M, Grigoriev, IV, Greer, C, Bakermans, C & Whyte, L 2016, 'Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica', Genome Announcements, vol. 4, no. 2, e00069-16. https://doi.org/10.1128/genomeA.00069-16

Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica. / Goordial, Jacqueline; Raymond-Bouchard, Isabelle; Riley, Robert et al.
In: Genome Announcements, Vol. 4, No. 2, e00069-16, 2016.

Research output: Contribution to journal › Article › peer-review

TY - JOUR

T1 - Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica

AU - Goordial, Jacqueline

AU - Raymond-Bouchard, Isabelle

AU - Riley, Robert

AU - Ronholm, Jennifer

AU - Shapiro, Nicole

AU - Woyke, Tanja

AU - LaButti, Kurt M.

AU - Tice, Hope

AU - Amirebrahimi, Mojgan

AU - Grigoriev, Igor V.

AU - Greer, Charles

AU - Bakermans, Corien

AU - Whyte, Lyle

PY - 2016

Y1 - 2016

N2 - Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.

AB - Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.

UR - https://www.scopus.com/pages/publications/85009840515

UR - https://www.scopus.com/pages/publications/85009840515#tab=citedBy

U2 - 10.1128/genomeA.00069-16

DO - 10.1128/genomeA.00069-16

M3 - Article

C2 - 26988035

AN - SCOPUS:85009840515

SN - 2169-8287

VL - 4

JO - Genome Announcements

JF - Genome Announcements

IS - 2

M1 - e00069-16

ER -

Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica

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