Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome

Terrence H. Bell; Ryan V. Trexler; Xin Peng; Marcel Huntemann; Alicia Clum; Brian Foster; Bryce Foster; Simon Roux; Krishnaveni Palaniappan; Neha Varghese; Supratim Mukherjee; T. B.K. Reddy; Chris Daum; Alex Copeland; Natalia N. Ivanova; Nikos C. Kyrpides; Christa Pennacchio; Emiley A. Eloe-Fadrosh; Mary Ann Bruns

doi:10.1128/MRA.01361-19

Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome

Terrence H. Bell, Ryan V. Trexler, Xin Peng, Marcel Huntemann, Alicia Clum, Brian Foster, Bryce Foster, Simon Roux, Krishnaveni Palaniappan, Neha Varghese, Supratim Mukherjee, T. B.K. Reddy, Chris Daum, Alex Copeland, Natalia N. Ivanova, Nikos C. Kyrpides, Christa Pennacchio, Emiley A. Eloe-Fadrosh, Mary Ann Bruns

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2 Scopus citations

Abstract

Soil surface consortia are easily observed and sampled, allowing examination of their interactions with soil microbiomes. Here, we present metatranscriptomic sequences from Dark Green 1 (DG1), a cyanobacterium-based soil surface consortium, in the presence and absence of an underlying soil microbiome and/or urea.

Original language	English (US)
Article number	e01361-19
Journal	Microbiology Resource Announcements
Volume	9
Issue number	1
DOIs	https://doi.org/10.1128/MRA.01361-19
State	Published - Jan 2 2020

All Science Journal Classification (ASJC) codes

Molecular Biology
Immunology and Microbiology (miscellaneous)
Genetics

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10.1128/MRA.01361-19

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Bell, T. H., Trexler, R. V., Peng, X., Huntemann, M., Clum, A., Foster, B., Foster, B., Roux, S., Palaniappan, K., Varghese, N., Mukherjee, S., Reddy, T. B. K., Daum, C., Copeland, A., Ivanova, N. N., Kyrpides, N. C., Pennacchio, C., Eloe-Fadrosh, E. A., & Bruns, M. A. (2020). Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome. Microbiology Resource Announcements, 9(1), Article e01361-19. https://doi.org/10.1128/MRA.01361-19

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abstract = "Soil surface consortia are easily observed and sampled, allowing examination of their interactions with soil microbiomes. Here, we present metatranscriptomic sequences from Dark Green 1 (DG1), a cyanobacterium-based soil surface consortium, in the presence and absence of an underlying soil microbiome and/or urea.",

author = "Bell, {Terrence H.} and Trexler, {Ryan V.} and Xin Peng and Marcel Huntemann and Alicia Clum and Brian Foster and Bryce Foster and Simon Roux and Krishnaveni Palaniappan and Neha Varghese and Supratim Mukherjee and Reddy, {T. B.K.} and Chris Daum and Alex Copeland and Ivanova, {Natalia N.} and Kyrpides, {Nikos C.} and Christa Pennacchio and Eloe-Fadrosh, {Emiley A.} and Bruns, {Mary Ann}",

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Bell, TH, Trexler, RV, Peng, X, Huntemann, M, Clum, A, Foster, B, Foster, B, Roux, S, Palaniappan, K, Varghese, N, Mukherjee, S, Reddy, TBK, Daum, C, Copeland, A, Ivanova, NN, Kyrpides, NC, Pennacchio, C, Eloe-Fadrosh, EA & Bruns, MA 2020, 'Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome', Microbiology Resource Announcements, vol. 9, no. 1, e01361-19. https://doi.org/10.1128/MRA.01361-19

TY - JOUR

T1 - Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome

AU - Bell, Terrence H.

AU - Trexler, Ryan V.

AU - Peng, Xin

AU - Huntemann, Marcel

AU - Clum, Alicia

AU - Foster, Brian

AU - Foster, Bryce

AU - Roux, Simon

AU - Palaniappan, Krishnaveni

AU - Varghese, Neha

AU - Mukherjee, Supratim

AU - Reddy, T. B.K.

AU - Daum, Chris

AU - Copeland, Alex

AU - Ivanova, Natalia N.

AU - Kyrpides, Nikos C.

AU - Pennacchio, Christa

AU - Eloe-Fadrosh, Emiley A.

AU - Bruns, Mary Ann

PY - 2020/1/2

Y1 - 2020/1/2

N2 - Soil surface consortia are easily observed and sampled, allowing examination of their interactions with soil microbiomes. Here, we present metatranscriptomic sequences from Dark Green 1 (DG1), a cyanobacterium-based soil surface consortium, in the presence and absence of an underlying soil microbiome and/or urea.

AB - Soil surface consortia are easily observed and sampled, allowing examination of their interactions with soil microbiomes. Here, we present metatranscriptomic sequences from Dark Green 1 (DG1), a cyanobacterium-based soil surface consortium, in the presence and absence of an underlying soil microbiome and/or urea.

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DO - 10.1128/MRA.01361-19

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SN - 2169-8287

VL - 9

JO - Microbiology Resource Announcements

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IS - 1

M1 - e01361-19

ER -

Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome

Abstract

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