Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome

Terrence H. Bell; Ryan V. Trexler; Xin Peng; Marcel Huntemann; Alicia Clum; Brian Foster; Bryce Foster; Simon Roux; Krishnaveni Palaniappan; Neha Varghese; Supratim Mukherjee; T. B.K. Reddy; Chris Daum; Alex Copeland; Natalia N. Ivanova; Nikos C. Kyrpides; Christa Pennacchio; Emiley A. Eloe-Fadrosh; Mary Ann Bruns

doi:10.1128/MRA.01361-19

Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome

Terrence H. Bell
, Ryan V. Trexler
, Xin Peng
, Marcel Huntemann
, Alicia Clum
, Brian Foster
, Bryce Foster
, Simon Roux
, Krishnaveni Palaniappan
, Neha Varghese
, Supratim Mukherjee
, T. B.K. Reddy
, Chris Daum
, Alex Copeland
, Natalia N. Ivanova
, Nikos C. Kyrpides
, Christa Pennacchio
, Emiley A. Eloe-Fadrosh
, Mary Ann Bruns

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Abstract

Soil surface consortia are easily observed and sampled, allowing examination of their interactions with soil microbiomes. Here, we present metatranscriptomic sequences from Dark Green 1 (DG1), a cyanobacterium-based soil surface consortium, in the presence and absence of an underlying soil microbiome and/or urea.

Original language	English (US)
Article number	e01361-19
Journal	Microbiology Resource Announcements
Volume	9
Issue number	1
DOIs	https://doi.org/10.1128/MRA.01361-19
State	Published - Jan 2 2020

All Science Journal Classification (ASJC) codes

Molecular Biology
Immunology and Microbiology (miscellaneous)
Genetics

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10.1128/MRA.01361-19

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Bell, T. H., Trexler, R. V., Peng, X., Huntemann, M., Clum, A., Foster, B., Foster, B., Roux, S., Palaniappan, K., Varghese, N., Mukherjee, S., Reddy, T. B. K., Daum, C., Copeland, A., Ivanova, N. N., Kyrpides, N. C., Pennacchio, C., Eloe-Fadrosh, E. A., & Bruns, M. A. (2020). Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome. Microbiology Resource Announcements, 9(1), Article e01361-19. https://doi.org/10.1128/MRA.01361-19

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abstract = "Soil surface consortia are easily observed and sampled, allowing examination of their interactions with soil microbiomes. Here, we present metatranscriptomic sequences from Dark Green 1 (DG1), a cyanobacterium-based soil surface consortium, in the presence and absence of an underlying soil microbiome and/or urea.",

author = "Bell, \{Terrence H.\} and Trexler, \{Ryan V.\} and Xin Peng and Marcel Huntemann and Alicia Clum and Brian Foster and Bryce Foster and Simon Roux and Krishnaveni Palaniappan and Neha Varghese and Supratim Mukherjee and Reddy, \{T. B.K.\} and Chris Daum and Alex Copeland and Ivanova, \{Natalia N.\} and Kyrpides, \{Nikos C.\} and Christa Pennacchio and Eloe-Fadrosh, \{Emiley A.\} and Bruns, \{Mary Ann\}",

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doi = "10.1128/MRA.01361-19",

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Bell, TH, Trexler, RV, Peng, X, Huntemann, M, Clum, A, Foster, B, Foster, B, Roux, S, Palaniappan, K, Varghese, N, Mukherjee, S, Reddy, TBK, Daum, C, Copeland, A, Ivanova, NN, Kyrpides, NC, Pennacchio, C, Eloe-Fadrosh, EA & Bruns, MA 2020, 'Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome', Microbiology Resource Announcements, vol. 9, no. 1, e01361-19. https://doi.org/10.1128/MRA.01361-19

TY - JOUR

T1 - Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome

AU - Bell, Terrence H.

AU - Trexler, Ryan V.

AU - Peng, Xin

AU - Huntemann, Marcel

AU - Clum, Alicia

AU - Foster, Brian

AU - Foster, Bryce

AU - Roux, Simon

AU - Palaniappan, Krishnaveni

AU - Varghese, Neha

AU - Mukherjee, Supratim

AU - Reddy, T. B.K.

AU - Daum, Chris

AU - Copeland, Alex

AU - Ivanova, Natalia N.

AU - Kyrpides, Nikos C.

AU - Pennacchio, Christa

AU - Eloe-Fadrosh, Emiley A.

AU - Bruns, Mary Ann

PY - 2020/1/2

Y1 - 2020/1/2

N2 - Soil surface consortia are easily observed and sampled, allowing examination of their interactions with soil microbiomes. Here, we present metatranscriptomic sequences from Dark Green 1 (DG1), a cyanobacterium-based soil surface consortium, in the presence and absence of an underlying soil microbiome and/or urea.

AB - Soil surface consortia are easily observed and sampled, allowing examination of their interactions with soil microbiomes. Here, we present metatranscriptomic sequences from Dark Green 1 (DG1), a cyanobacterium-based soil surface consortium, in the presence and absence of an underlying soil microbiome and/or urea.

UR - https://www.scopus.com/pages/publications/85077929349

UR - https://www.scopus.com/pages/publications/85077929349#tab=citedBy

U2 - 10.1128/MRA.01361-19

DO - 10.1128/MRA.01361-19

M3 - Article

C2 - 31896648

AN - SCOPUS:85077929349

SN - 2169-8287

VL - 9

JO - Microbiology Resource Announcements

JF - Microbiology Resource Announcements

IS - 1

M1 - e01361-19

ER -

Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome

Abstract

All Science Journal Classification (ASJC) codes

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