TY - JOUR
T1 - mNSC1 shows no evidence of protein-coding capacity
AU - Wilson, Christina
AU - Goetting-Minesky, Paula
AU - Nekrutenko, Anton
N1 - Funding Information:
We would like to thank Pamela Mitchell for M. musculus genomic DNA and tissues, Kateryna Makova for providing lab space and David Coelho for his help in RNA extraction. This study has been supported by funds from the Eberly College of Science and by the Huck Institutes for the Life Sciences.
Copyright:
Copyright 2008 Elsevier B.V., All rights reserved.
PY - 2006/3/29
Y1 - 2006/3/29
N2 - The Mus musculus non-selective cation channel gene mNSC1 was used as a classical example of a gene derived from transposable elements. To study the evolution of mNSC1 in M. musculus we sequenced this locus in M. musculus, M. hortulanus, M. spretus, M. caroli, and M. pahari. We found that the previously published 1,275 bp coding region was not present in any of these species. We identified a second possible coding region that was present only in M. musculus. However, RT-PCR experiments did not confirm the expression of the second reading frame. Our findings suggest that mNSC1 lacks protein-coding capacity and highlight the need for comparative validation of all TE-containing genes.
AB - The Mus musculus non-selective cation channel gene mNSC1 was used as a classical example of a gene derived from transposable elements. To study the evolution of mNSC1 in M. musculus we sequenced this locus in M. musculus, M. hortulanus, M. spretus, M. caroli, and M. pahari. We found that the previously published 1,275 bp coding region was not present in any of these species. We identified a second possible coding region that was present only in M. musculus. However, RT-PCR experiments did not confirm the expression of the second reading frame. Our findings suggest that mNSC1 lacks protein-coding capacity and highlight the need for comparative validation of all TE-containing genes.
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U2 - 10.1016/j.gene.2005.11.016
DO - 10.1016/j.gene.2005.11.016
M3 - Article
C2 - 16476528
AN - SCOPUS:33644870068
SN - 0378-1119
VL - 370
SP - 83
EP - 85
JO - Gene
JF - Gene
IS - 1-2
ER -