TY - JOUR
T1 - Novel approaches for the accumulation of oxygenated intermediates to multi-millimolar concentrations
AU - Krebs, Carsten
AU - Dassama, Laura M.K.
AU - Matthews, Megan L.
AU - Jiang, Wei
AU - Price, John C.
AU - Korboukh, Victoria
AU - Li, Ning
AU - Bollinger, J. Martin
N1 - Funding Information:
This work was supported by the National Institutes of Health ( GM-55365 , GM-69657 , and DK-74641 to JMB and CK), the National Science Foundation ( MCB-642058 , CHE-724084 , and CHE-1058931 to JMB and CK), and the Alfred P. Sloan Foundation Minority PhD Scholarship Program (to LMKD). We thank our co-workers and collaborators whose work is cited herein. This paper is dedicated to Ed Solomon on the occasion of his 65th birthday. The approaches summarized here set the stage to continue our joint work with Ed and to provide his group with milliliters of samples containing intermediates in the multi-millimolar range for more detailed characterization. We look forward to this work.
PY - 2013/1/1
Y1 - 2013/1/1
N2 - Metalloenzymes that utilize molecular oxygen as a co-substrate catalyze a wide variety of chemically difficult oxidation reactions. Significant insight into the reaction mechanisms of these enzymes can be obtained by the application of a combination of rapid kinetic and spectroscopic methods to the direct structural characterization of intermediate states. A key limitation of this approach is the low aqueous solubility (<2mM) of the co-substrate, O 2, which undergoes further dilution (typically by one-third or one-half) upon initiation of reactions by rapid-mixing. This situation imposes a practical upper limit on [O 2] (and therefore on the concentration of reactive intermediate(s) that can be rapidly accumulated) of ∼1-1.3mM in such experiments as they are routinely carried out. However, many spectroscopic methods benefit from or require significantly greater concentrations of the species to be studied. To overcome this problem, we have recently developed two new approaches for the preparation of samples of oxygenated intermediates: (1) direct oxygenation of reduced metalloenzymes using gaseous O 2 and (2) the in situ generation of O 2 from chlorite catalyzed by the enzyme chlorite dismutase (Cld). Whereas the former method is applicable only to intermediates with half lives of several minutes, owing to the sluggishness of transport of O 2 across the gas-liquid interface, the latter approach has been successfully applied to trap several intermediates at high concentration and purity by the freeze-quench method. The in situ approach permits generation of a pulse of at least 5mM O 2 within ∼1ms and accumulation of O 2 to effective concentrations of up to ∼11mM (i.e. ∼10-fold greater than by the conventional approach). The use of these new techniques for studies of oxygenases and oxidases is discussed.
AB - Metalloenzymes that utilize molecular oxygen as a co-substrate catalyze a wide variety of chemically difficult oxidation reactions. Significant insight into the reaction mechanisms of these enzymes can be obtained by the application of a combination of rapid kinetic and spectroscopic methods to the direct structural characterization of intermediate states. A key limitation of this approach is the low aqueous solubility (<2mM) of the co-substrate, O 2, which undergoes further dilution (typically by one-third or one-half) upon initiation of reactions by rapid-mixing. This situation imposes a practical upper limit on [O 2] (and therefore on the concentration of reactive intermediate(s) that can be rapidly accumulated) of ∼1-1.3mM in such experiments as they are routinely carried out. However, many spectroscopic methods benefit from or require significantly greater concentrations of the species to be studied. To overcome this problem, we have recently developed two new approaches for the preparation of samples of oxygenated intermediates: (1) direct oxygenation of reduced metalloenzymes using gaseous O 2 and (2) the in situ generation of O 2 from chlorite catalyzed by the enzyme chlorite dismutase (Cld). Whereas the former method is applicable only to intermediates with half lives of several minutes, owing to the sluggishness of transport of O 2 across the gas-liquid interface, the latter approach has been successfully applied to trap several intermediates at high concentration and purity by the freeze-quench method. The in situ approach permits generation of a pulse of at least 5mM O 2 within ∼1ms and accumulation of O 2 to effective concentrations of up to ∼11mM (i.e. ∼10-fold greater than by the conventional approach). The use of these new techniques for studies of oxygenases and oxidases is discussed.
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U2 - 10.1016/j.ccr.2012.06.020
DO - 10.1016/j.ccr.2012.06.020
M3 - Review article
C2 - 24368870
AN - SCOPUS:84870389719
SN - 0010-8545
VL - 257
SP - 234
EP - 243
JO - Coordination Chemistry Reviews
JF - Coordination Chemistry Reviews
IS - 1
ER -