TY - GEN
T1 - Optimizing phage λ survival in a changing environment
T2 - 55th IEEE Conference on Decision and Control, CDC 2016
AU - Conway, Jessica M.
AU - Dennehy, John J.
AU - Singh, Abhyudai
N1 - Publisher Copyright:
© 2016 IEEE.
PY - 2016/12/27
Y1 - 2016/12/27
N2 - Bacteriophages - viruses that infect and replicate inside bacteria - undergo rapid degradation outside their hosts. Thus, a common expectation is that phages will minimize environmental exposure by maximizing their adsorption rate, i.e., infection rate. Here we show that, while maximized adsorption is a good strategy when bacterial host cells are healthy, situations exist where bypassing hosts may be beneficial, such as when host cells are not productive for infection. In these situations, optimal adsorption rates may take on intermediate values, thereby increasing phage dispersal. We aim to develop a theoretical understanding of the intermediate, optimal adsorption rate for phage λ, in environments where changing conditions lead to either good or poor quality hosts. We develop a Markov chain model and define optimal adsorption as the adsorption rate that maximizes the probability of survival. We impose experimentally-achievable periodicity in environmental change and derive novel analytic results for the probability of phage λ survival, from which optimal adsorption is computed. We then discuss the sensitivity of the phage survival probability to relevant biological parameters and environmental conditions. Finally, we extend these results to approximate the probability of phage λ survival when environment change is random, which better represents of natural dynamics, and show that stochasticity facilitates phage λ survival in sub-optimal conditions.
AB - Bacteriophages - viruses that infect and replicate inside bacteria - undergo rapid degradation outside their hosts. Thus, a common expectation is that phages will minimize environmental exposure by maximizing their adsorption rate, i.e., infection rate. Here we show that, while maximized adsorption is a good strategy when bacterial host cells are healthy, situations exist where bypassing hosts may be beneficial, such as when host cells are not productive for infection. In these situations, optimal adsorption rates may take on intermediate values, thereby increasing phage dispersal. We aim to develop a theoretical understanding of the intermediate, optimal adsorption rate for phage λ, in environments where changing conditions lead to either good or poor quality hosts. We develop a Markov chain model and define optimal adsorption as the adsorption rate that maximizes the probability of survival. We impose experimentally-achievable periodicity in environmental change and derive novel analytic results for the probability of phage λ survival, from which optimal adsorption is computed. We then discuss the sensitivity of the phage survival probability to relevant biological parameters and environmental conditions. Finally, we extend these results to approximate the probability of phage λ survival when environment change is random, which better represents of natural dynamics, and show that stochasticity facilitates phage λ survival in sub-optimal conditions.
UR - http://www.scopus.com/inward/record.url?scp=85010831245&partnerID=8YFLogxK
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U2 - 10.1109/CDC.2016.7799174
DO - 10.1109/CDC.2016.7799174
M3 - Conference contribution
AN - SCOPUS:85010831245
T3 - 2016 IEEE 55th Conference on Decision and Control, CDC 2016
SP - 5881
EP - 5887
BT - 2016 IEEE 55th Conference on Decision and Control, CDC 2016
PB - Institute of Electrical and Electronics Engineers Inc.
Y2 - 12 December 2016 through 14 December 2016
ER -