TY - JOUR
T1 - Prior sample size extensions for assessing prior impact and prior-likelihood discordance
AU - Reimherr, Matthew
AU - Meng, Xiao Li
AU - Nicolae, Dan L.
N1 - Funding Information:
We thank Andrew Gelman for insight comments and help regarding Section 4.3 , Murali Haran for his help in Section 4.1 , David Jones and Steven Finch for very helpful proofreading, and a good number of reviewers for their comments that have led to a much improved paper. We also thank the U.S. National Science Foundation, National Institutes of Health, as well as the John Templeton Foundation for partial financial support.
Publisher Copyright:
© 2021 Royal Statistical Society
PY - 2021/7
Y1 - 2021/7
N2 - This paper outlines a framework for quantifying the prior’s contribution to posterior inference in the presence of prior-likelihood discordance, a broader concept than the usual notion of prior-likelihood conflict. We achieve this dual purpose by extending the classic notion of prior sample size, M, in three directions: (I) estimating M beyond conjugate families; (II) formulating M as a relative notion that is as a function of the likelihood sample size k, M(k), which also leads naturally to a graphical diagnosis; and (III) permitting negative M, as a measure of prior-likelihood conflict, that is, harmful discordance. Our asymptotic regime permits the prior sample size to grow with the likelihood data size, hence making asymptotic arguments meaningful for investigating the impact of the prior relative to that of likelihood. It leads to a simple asymptotic formula for quantifying the impact of a proper prior that only involves computing a centrality and a spread measure of the prior and the posterior. We use simulated and real data to illustrate the potential of the proposed framework, including quantifying how weak is a ‘weakly informative’ prior adopted in a study of lupus nephritis. Whereas we take a pragmatic perspective in assessing the impact of a prior on a given inference problem under a specific evaluative metric, we also touch upon conceptual and theoretical issues such as using improper priors and permitting priors with asymptotically non-vanishing influence.
AB - This paper outlines a framework for quantifying the prior’s contribution to posterior inference in the presence of prior-likelihood discordance, a broader concept than the usual notion of prior-likelihood conflict. We achieve this dual purpose by extending the classic notion of prior sample size, M, in three directions: (I) estimating M beyond conjugate families; (II) formulating M as a relative notion that is as a function of the likelihood sample size k, M(k), which also leads naturally to a graphical diagnosis; and (III) permitting negative M, as a measure of prior-likelihood conflict, that is, harmful discordance. Our asymptotic regime permits the prior sample size to grow with the likelihood data size, hence making asymptotic arguments meaningful for investigating the impact of the prior relative to that of likelihood. It leads to a simple asymptotic formula for quantifying the impact of a proper prior that only involves computing a centrality and a spread measure of the prior and the posterior. We use simulated and real data to illustrate the potential of the proposed framework, including quantifying how weak is a ‘weakly informative’ prior adopted in a study of lupus nephritis. Whereas we take a pragmatic perspective in assessing the impact of a prior on a given inference problem under a specific evaluative metric, we also touch upon conceptual and theoretical issues such as using improper priors and permitting priors with asymptotically non-vanishing influence.
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U2 - 10.1111/rssb.12414
DO - 10.1111/rssb.12414
M3 - Article
AN - SCOPUS:85103551942
SN - 1369-7412
VL - 83
SP - 413
EP - 437
JO - Journal of the Royal Statistical Society. Series B: Statistical Methodology
JF - Journal of the Royal Statistical Society. Series B: Statistical Methodology
IS - 3
ER -