TY - JOUR
T1 - The volcano effect in bacterial chemotaxis
AU - Simons, Julie E.
AU - Milewski, Paul A.
N1 - Funding Information:
This research was funded by the US Department of Energy Genomics: GTL and SciDAC Programs (DE-FG02-04ER25627).
PY - 2011/4
Y1 - 2011/4
N2 - A population-level model of bacterial chemotaxis is derived from a simple bacterial-level model of behavior. This model, to be contrasted with the Keller-Segel equations, exhibits behavior we refer to as the "volcano effect": steady-state bacterial aggregation forming a ring of higher density some distance away from an optimal environment. The model is derived, as in Erban and Othmer (2004) [1], from a transport equation in a state space including the internal biochemical variables of the bacteria and then simplified with a truncation at low moments with respect to these variables. We compare the solutions of the model to stochastic simulations of many bacteria, as well as the classic Keller-Segel model. This model captures behavior that the Keller-Segel model is unable to resolve, and sheds light on two different mechanisms that can cause a volcano effect.
AB - A population-level model of bacterial chemotaxis is derived from a simple bacterial-level model of behavior. This model, to be contrasted with the Keller-Segel equations, exhibits behavior we refer to as the "volcano effect": steady-state bacterial aggregation forming a ring of higher density some distance away from an optimal environment. The model is derived, as in Erban and Othmer (2004) [1], from a transport equation in a state space including the internal biochemical variables of the bacteria and then simplified with a truncation at low moments with respect to these variables. We compare the solutions of the model to stochastic simulations of many bacteria, as well as the classic Keller-Segel model. This model captures behavior that the Keller-Segel model is unable to resolve, and sheds light on two different mechanisms that can cause a volcano effect.
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U2 - 10.1016/j.mcm.2010.01.019
DO - 10.1016/j.mcm.2010.01.019
M3 - Article
AN - SCOPUS:79951578607
SN - 0895-7177
VL - 53
SP - 1374
EP - 1388
JO - Mathematical and Computer Modelling
JF - Mathematical and Computer Modelling
IS - 7-8
ER -